BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028F04LP1|AL428935
(875 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1305 1735 0.0
>3x_Contig1305
Length = 9229
Score = 1735 bits (875), Expect = 0.0
Identities = 875/875 (100%)
Strand = Plus / Minus
Query: 1 gctctcttttgtcttctgcttttgttagtttggcaaagtccttctttgtgtatggcttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4393 gctctcttttgtcttctgcttttgttagtttggcaaagtccttctttgtgtatggcttga 4334
Query: 61 gaatgtggaaactacccttgacggattgctcaagtttttctagatccggagaaatttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4333 gaatgtggaaactacccttgacggattgctcaagtttttctagatccggagaaatttgga 4274
Query: 121 tgttttttgtcaacggttccacctgcaatttcaaaatggaagctggcacgtattcaccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4273 tgttttttgtcaacggttccacctgcaatttcaaaatggaagctggcacgtattcaccaa 4214
Query: 181 agttgtctttgttcgctgtcatacgcttactgacgttctttccattaattgtgacaccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4213 agttgtctttgttcgctgtcatacgcttactgacgttctttccattaattgtgacaccat 4154
Query: 241 cattcaatgaacgatgcacagggaagtcggcgtcttttagtgttgaaactgcatatctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4153 cattcaatgaacgatgcacagggaagtcggcgtcttttagtgttgaaactgcatatctga 4094
Query: 301 atgtccttgcactgaaagttggagccagagcaggtctgtatcttagcaacgataacggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4093 atgtccttgcactgaaagttggagccagagcaggtctgtatcttagcaacgataacggtg 4034
Query: 361 ttggatcttgtggaacatatacagccgagttgtgaatattttgcacaacgttttccgatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4033 ttggatcttgtggaacatatacagccgagttgtgaatattttgcacaacgttttccgatc 3974
Query: 421 ccaaattactggaaattttcaaccctggaacggttttacgagttttcctttcatcgcttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3973 ccaaattactggaaattttcaaccctggaacggttttacgagttttcctttcatcgcttc 3914
Query: 481 tacgattctgtctggtacccaaattttgaactttgcctgaaatctcactatactcattag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3913 tacgattctgtctggtacccaaattttgaactttgcctgaaatctcactatactcattag 3854
Query: 541 taccggtaatctttggtgtctgtcttttagccgtacctgtttgtactaccgggccattgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3853 taccggtaatctttggtgtctgtcttttagccgtacctgtttgtactaccgggccattgg 3794
Query: 601 ttcctctagtatccgttctttgtgttctttctctaaaatttttaccaccacggtcttgac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3793 ttcctctagtatccgttctttgtgttctttctctaaaatttttaccaccacggtcttgac 3734
Query: 661 cattacggacttgtctattatccctgggtttatttcctccggatctgtcatcaaatcttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3733 cattacggacttgtctattatccctgggtttatttcctccggatctgtcatcaaatcttg 3674
Query: 721 ctgtttgtctcttatcttccctcccagctgacctcacctttctgtcagatcttggtttac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3673 ctgtttgtctcttatcttccctcccagctgacctcacctttctgtcagatcttggtttac 3614
Query: 781 gtggttctcttgccttgataggaacttccttcactctttgcaaaactgatgctaaaaagt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3613 gtggttctcttgccttgataggaacttccttcactctttgcaaaactgatgctaaaaagt 3554
Query: 841 ccggagagacagagctataagcccttttagagaat 875
|||||||||||||||||||||||||||||||||||
Sbjct: 3553 ccggagagacagagctataagcccttttagagaat 3519
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5908
Number of Sequences: 1807
Number of extensions: 5908
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 875
length of database: 10,358,551
effective HSP length: 16
effective length of query: 859
effective length of database: 10,329,639
effective search space: 8873159901
effective search space used: 8873159901
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)